{"id":160,"date":"2022-08-31T11:25:35","date_gmt":"2022-08-31T02:25:35","guid":{"rendered":"https:\/\/wps.itc.kansai-u.ac.jp\/eme\/?page_id=160"},"modified":"2026-03-09T13:52:44","modified_gmt":"2026-03-09T04:52:44","slug":"publication","status":"publish","type":"page","link":"https:\/\/wps.itc.kansai-u.ac.jp\/eme\/publication\/","title":{"rendered":"Publication"},"content":{"rendered":"\n

2025<\/h2>\n\n\n\n
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  1. Yamamoto, T., Okano, K., Iwaki, H. Complete genome sequence of Chelatococcus<\/em> sp. strain KU-N122 (JCM 37729) isolated from a cyclooctanone enrichment culture. Microbiol.<\/em> Resour. Announc.<\/em>, <\/em>14(12):<\/strong>e01021-25<\/li>\n\n\n\n
  2. Hashimoto, R., Nishiyama, K., Namai, F., Suzuki, K., Sakuma, T., Fukuda, I., Sugiyama, Y., Okano, K., Shanoh, T., Toyoshi, E., Ohgi, R., Sudeb, S., Tsuchida, S., Nishiyama, E., Mukai, T., Furukawa, M., Nochi, T., Villena, J., Ikeda-Otsubo, W., Yoshioka, G., Nakazaki, E., Suda, Y., Kitazawa, H. Milk sialyl-oligosaccharides mediate the early colonization of gut commensal microbes in piglets. Microbiome<\/em>, 13:<\/strong>135<\/li>\n\n\n\n
  3. Otsuka, R., Sato, Y., Okano, K., Okamura, E., Tomita, H., Honda, K., Kitani, S. Identification of a critical gene involved in the biosynthesis of the polyene macrolide lavencidin in Streptomyces lavendulae<\/em> FRI-5 using the Target-AID (activation-induced cytidine deaminase) base editing technology. Appl. Envrion. Microbiol.<\/em>, 91(5):<\/strong>e00975-24<\/li>\n\n\n\n
  4. Wu, C.-C., Okano, K., Religia, P., Soma, Y., Takahashi, M., Izumi, Y., Bamba, T., Honda, K. Combination of two-stage continuous feeding and optimized synthetic medium increases lipid production in Lipomyces starkeyi<\/em>. Eng. Life Sci.<\/em>, 25(1):<\/strong>e70003<\/li>\n<\/ol>\n<\/div><\/div>\n\n\n\n
    <\/div>\n\n\n\n

    2024<\/h2>\n\n\n\n
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    1. \u5ca1\u91ce\u61b2\u53f8. \u4eba\u5de5\u30d5\u30a1\u30fc\u30b8\u3092\u7528\u3044\u3066\u6a19\u7684\u5fae\u751f\u7269\u3060\u3051\u3092\u6e1b\u5c11\u3055\u305b\u308b\u83cc\u53e2\u6539\u5909\u6cd5. \u30d0\u30a4\u30aa\u30b5\u30a4\u30a8\u30f3\u30b9\u3068\u30a4\u30f3\u30c0\u30b9\u30c8\u30ea\u30fc, 82:<\/strong>580-581<\/li>\n\n\n\n
    2. \u5ca1\u91ce\u61b2\u53f8.\u300c\u5fae\u751f\u7269\u3092\u7528\u3044\u305f\u6709\u7528\u7269\u8cea\u751f\u7523\u6280\u8853\u306e\u958b\u767a\u300d\u7b2c2\u7ae0 \u7b2c8\u7bc0\u300c\u4e73\u9178\u767a\u9175\u3068\u305d\u306e\u7559\u610f\u70b9\u300dpp.139-144, \u6280\u8853\u60c5\u5831\u5354\u4f1a\u51fa\u7248<\/li>\n\n\n\n
    3. Tanaka, T., Okano, K., Iwaki, H. Complete genome sequence of Paraburkholderia terrae<\/em> strain KU-46, a 2,4-dinitrophenol-degrading bacterium. Microbiol.<\/em> Resour. Announc.<\/em>, 13(6):<\/strong>e00282-24<\/li>\n\n\n\n
    4. Tanaka, T., Sugiyama, R., Sato, Y., Kawaguchi, M., Honda, K., Iwaki, H., Okano, K. Precise microbiome engineering using natural and synthetic bacteriophages targeting an artificial bacterial consortium. Front. Microbiol.<\/em>, 15:<\/strong>1403903\uff08\u8a73\u7d30\u306f\u3053\u3061\u3089\uff09<\/a><\/li>\n\n\n\n
    5. Sato, Y., Okano, K., Honda, K. Effects of small heat shock proteins from thermotolerant bacteria on the stress resistance of Escherichia coli<\/em> to temperature, pH, and hyperosmolarity. Extremophiles<\/em>, 28(1):<\/strong>12<\/li>\n\n\n\n
    6. Liu, Y., Okano, K., Iwaki, H. Identification and characterization of a pab gene cluster responsible for the 4-aminobenzoate degradation pathway, including its involvement in the formation of a \u03b3-glutamylated intermediate in Paraburkholderia terrae<\/em> strain KU-15. J. Biosci. Bioeng.<\/em>, 137(1):<\/strong>38-46<\/li>\n\n\n\n
    7. Hizume, T., Sato, Y., Iwaki, H., Honda, K., Okano, K. Subtractive modification of bacterial consortium using antisense peptide nucleic acids. Front. Microbiol.<\/em>, 14:<\/strong>1321428\uff08\u8a73\u7d30\u306f\u3053\u3061\u3089\uff09<\/a><\/li>\n<\/ol>\n\n\n\n
      <\/div>\n<\/div><\/div>\n\n\n\n
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      2023<\/h2>\n\n\n\n
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      1. Liu, Y., Yamamoto, T., Kohaya, N., Yamamoto, K., Okano, K., Sumiyoshi, T., Hasegawa, Y., Lau, P.C.K., Iwaki, H. Cloning of two gene clusters involved in the catabolism of 2,4-dinitrophenol by Paraburkholderia<\/em> sp. strain KU-46 and characterization of the initial DnpAB enzymes and a two-component monooxygenases DnpC1C2.  J. Biosci. Bioeng., <\/em>136(3):<\/strong>223-231<\/li>\n<\/ol>\n\n\n\n
        <\/div>\n<\/div><\/div>\n\n\n\n

        2022<\/h2>\n\n\n\n
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        1. Yakabe, K., Higashi, S., Akiyama, M., Mori, H., Murakami, T., Toyoda, A., Sugiyama, Y., Kishino, S., Okano, K., Hirayama, A., Gotoh, A., Li, S., Mori, T., Katayama, T., Ogawa, J., Fukuda, S., Hase, K., Kim, Y.G.. Dietary-protein sources modulate host susceptibility to Clostridioides difficile <\/em>infection through the gut microbiota. Cell Rep.,<\/em> 40:<\/strong>111332<\/li>\n\n\n\n
        2. Suryatin Alim, G., Okano, K., Honda, K. One-step preparation of cell-free ATP regeneration module based on non-oxidative glycolysis using thermophilic enzymes. ChemBioChem<\/em>, 23:<\/strong>e202200210<\/li>\n\n\n\n
        3. Liu, Y., Okano, K., Iwaki, H. Complete genome sequence of Paraburkholderia terrae <\/em>strain KU-15, a 2-nitrobenzoate-degrading bacterium. Microbiol. Resour. Announc.<\/em>, 11:<\/strong>e00373-22<\/li>\n\n\n\n
        4. Okano, K., Sato, Y., Hama, S., Tanaka, T., Noda, H., Kondo, A., Honda, K. L-Lactate oxidase-mediated removal of L-lactic acid derived from fermentation medium for the production of optically pure D-lactic acid. Biotechnol. J.<\/em>, 17:<\/strong>e2100331.<\/li>\n\n\n\n
        5. Yamamoto, T., Hasegawa, Y., Iwaki, H. Identification and characterization of a novel class of self-sufficient cytochrome P450 hydroxylase involved in cyclohexanecarboxylate degradation in Paraburkholderia terrae <\/em>strain KU-64. Biosci. Biotechnol. Biochem., <\/em>86(2):<\/strong>199-208<\/li>\n\n\n\n
        6. Mimura, S., Shimizu, T., Shingubara, S., Iwaki, H., Ito, T. Bactericidal effect of nanostructures via lytic transglycosylases of Escherichia coli<\/em>. RSC Adv., <\/em>12(3):<\/strong>1645-1652<\/li>\n<\/ol>\n\n\n\n

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